hydrogen bond

Converse of subject

• link: Two polynucleotides running in opposite directions are linked by hydrogen bonds between the bases forming base pairs.

Converse of object

• donate: In this context, the number of hydrogen bonds donated is surprisingly high.
• form: The ester is the only thing in the mixture which doesn't form hydrogen bonds, and so it has the weakest intermolecular forces.
• make: Move the " other " oxygen to a position at which it can make the appropriate hydrogen bonds.
• cause: An earlier version of act excluded various N/O and O/O combinations, but this was causing genuine hydrogen bonds to be missed.

Adjective modifier

• possible: It prints out all the possible hydrogen bonds to any of the three residue types.

Modifies a noun

• donor: All three hydrogen bond donor groups bind to the anion.
• parameter: The hydrogen bond parameters ( length, tolerance and max opening angle ) are defined in the squid_param file.
• group: All three hydrogen bond donor groups bind to the anion.
• routine: The explicit hydrogen bond routine is slower but more accurate and requires the presence of the polar hydrogen atoms.

Preposition: between

• molecule: Hydrogen bonds to water molecules ( ie isolated oxygen atoms ) are found, and also hydrogen bonds between water molecules.