Object

• system: Ideally if you want to run a solvated system you should use periodic boundaries.

• protein: TUTORIAL 4: Simulating a solvated protein that contains a non-standard residue.

• bilayer: MD simulations in a solvated phospholipid bilayer have been used to refine the structure of the TM domain of the M2 ion channel.

• specie: Molecules in clusters have properties similar to solvated species and cluster studies offer an opportunity of investigating these processes.

Subject

• molecule: This function shows us that the lithium cations are strongly solvated by 4 ammonia molecules.

Preposition: by

• molecule: This function shows us that the lithium cations are strongly solvated by 4 ammonia molecules.